MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Escherichia coli
19428wD4_HM13
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 110
bases: 5,033,648 bps
CDS: 4,645
rRNA: 10
Repeat region:
tmRNA: 1
tRNA: 79
misc RNA:
Total features: 4,735
Total number of protein coding genes annotated/found:
4,645
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Items 1 - 20
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Molecule ^
PID/GenBank ID *
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5033|JADGMH010000009.1
SEQF5033_04734
Genome Viewer
NA
AA
384/128
195927-195544
hypothetical protein
SEQF5033|JADGMH010000009.1
SEQF5033_04733
Genome Viewer
NA
AA
444/148
195038-195481
Peptidyl-lysine N-acetyltransferase YjaB
SEQF5033|JADGMH010000009.1
SEQF5033_04732
Genome Viewer
NA
AA
930/310
194881-193952
Homoserine O-succinyltransferase
SEQF5033|JADGMH010000009.1
SEQF5033_04731
Genome Viewer
NA
AA
1602/534
193683-192082
Malate synthase A
SEQF5033|JADGMH010000009.1
SEQF5033_04730
Genome Viewer
NA
AA
1305/435
192052-190748
Isocitrate lyase
SEQF5033|JADGMH010000009.1
SEQF5033_04729
Genome Viewer
NA
AA
1725/575
190532-188808
Isocitrate dehydrogenase kinase/phosphatase
SEQF5033|JADGMH010000009.1
SEQF5033_04728
Genome Viewer
NA
AA
825/275
187967-188791
Transcriptional repressor IclR
SEQF5033|JADGMH010000009.1
SEQF5033_04727
Genome Viewer
NA
AA
3684/1228
187767-184084
Methionine synthase
SEQF5033|JADGMH010000009.1
SEQF5033_04726
Genome Viewer
NA
AA
321/107
184024-183704
hypothetical protein
SEQF5033|JADGMH010000009.1
SEQF5033_04725
Genome Viewer
NA
AA
450/150
183661-183212
hypothetical protein
SEQF5033|JADGMH010000009.1
SEQF5033_04724
Genome Viewer
NA
AA
1632/544
183041-181410
hypothetical protein
SEQF5033|JADGMH010000009.1
SEQF5033_04723
Genome Viewer
NA
AA
690/230
180631-181320
Peptidase E
SEQF5033|JADGMH010000009.1
SEQF5033_04722
Genome Viewer
NA
AA
1230/410
179021-180250
Mannitol-1-phosphate 5-dehydrogenase
SEQF5033|JADGMH010000009.1
SEQF5033_04721
Genome Viewer
NA
AA
825/275
178145-178969
PTS system sorbose-specific EIID component
SEQF5033|JADGMH010000009.1
SEQF5033_04720
Genome Viewer
NA
AA
798/266
177337-178134
PTS system sorbose-specific EIIC component
SEQF5033|JADGMH010000009.1
SEQF5033_04719
Genome Viewer
NA
AA
495/165
176777-177271
PTS system sorbose-specific EIIB component
SEQF5033|JADGMH010000009.1
SEQF5033_04718
Genome Viewer
NA
AA
408/136
176370-176777
PTS system sorbose-specific EIIA component
SEQF5033|JADGMH010000009.1
SEQF5033_04717
Genome Viewer
NA
AA
807/269
175554-176360
Dihydroanticapsin 7-dehydrogenase
SEQF5033|JADGMH010000009.1
SEQF5033_04716
Genome Viewer
NA
AA
948/316
174537-175484
Sorbitol operon regulator
SEQF5033|JADGMH010000009.1
SEQF5033_04715
Genome Viewer
NA
AA
873/291
174189-173317
Dual-specificity RNA pseudouridine synthase RluF
Items 1 - 20
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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